mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-byh9lmmj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:09:54,772 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:09:55,797 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:09:56,005 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:10:14,668 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:10:14,772 - cnv_pipe.batch.run_model - INFO - Processing cluster 1065 with 178 probes
2026-06-03 05:10:15,406 - cnv_pipe.batch.run_model.cluster1065 - INFO - Child process started for cluster 1065 with 178 probes
2026-06-03 05:13:20,223 - cnv_pipe.batch.run_model.cluster1065 - INFO - Child process finished cluster 1065. Wrote cluster_1065_samples.csv and cluster_1065_params.csv
2026-06-03 05:13:20,226 - cnv_pipe.batch.run_model - INFO - Cluster 1065 finished in 185.45 seconds. Status: SUCCESS