File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3f/1df3d9b799e065c4dd6dd519228b24/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-89d17uwy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:10:42,463 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:10:43,926 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:10:44,201 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:11:07,802 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:11:07,907 - cnv_pipe.batch.run_model - INFO - Processing cluster 1305 with 176 probes
2026-06-03 05:11:08,466 - cnv_pipe.batch.run_model.cluster1305 - INFO - Child process started for cluster 1305 with 176 probes
2026-06-03 05:14:36,556 - cnv_pipe.batch.run_model.cluster1305 - INFO - Child process finished cluster 1305. Wrote cluster_1305_samples.csv and cluster_1305_params.csv
2026-06-03 05:14:36,558 - cnv_pipe.batch.run_model - INFO - Cluster 1305 finished in 208.65 seconds. Status: SUCCESS