mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-j1j3wvwk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:09:07,356 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:09:08,179 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:09:08,350 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:09:23,691 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:09:23,922 - cnv_pipe.batch.run_model - INFO - Processing cluster 879 with 197 probes
2026-06-03 05:09:24,299 - cnv_pipe.batch.run_model.cluster879 - INFO - Child process started for cluster 879 with 197 probes
2026-06-03 05:12:44,280 - cnv_pipe.batch.run_model.cluster879 - INFO - Child process finished cluster 879. Wrote cluster_879_samples.csv and cluster_879_params.csv
2026-06-03 05:12:44,282 - cnv_pipe.batch.run_model - INFO - Cluster 879 finished in 200.36 seconds. Status: SUCCESS