mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xlr5x_p6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:08:06,178 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:08:07,666 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:08:07,939 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:08:33,202 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:08:33,567 - cnv_pipe.batch.run_model - INFO - Processing cluster 592 with 193 probes
2026-06-03 05:08:34,318 - cnv_pipe.batch.run_model.cluster592 - INFO - Child process started for cluster 592 with 193 probes
2026-06-03 05:12:24,195 - cnv_pipe.batch.run_model.cluster592 - INFO - Child process finished cluster 592. Wrote cluster_592_samples.csv and cluster_592_params.csv
2026-06-03 05:12:24,198 - cnv_pipe.batch.run_model - INFO - Cluster 592 finished in 230.63 seconds. Status: SUCCESS