mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-e3lax0lr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:08:46,528 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:08:47,377 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:08:47,550 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:09:03,809 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:09:04,044 - cnv_pipe.batch.run_model - INFO - Processing cluster 576 with 194 probes
2026-06-03 05:09:04,480 - cnv_pipe.batch.run_model.cluster576 - INFO - Child process started for cluster 576 with 194 probes
2026-06-03 05:12:25,133 - cnv_pipe.batch.run_model.cluster576 - INFO - Child process finished cluster 576. Wrote cluster_576_samples.csv and cluster_576_params.csv
2026-06-03 05:12:25,135 - cnv_pipe.batch.run_model - INFO - Cluster 576 finished in 201.09 seconds. Status: SUCCESS