mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3slf9jtl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:08:00,058 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:08:01,007 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:08:01,198 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:08:18,314 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:08:18,571 - cnv_pipe.batch.run_model - INFO - Processing cluster 572 with 189 probes
2026-06-03 05:08:19,037 - cnv_pipe.batch.run_model.cluster572 - INFO - Child process started for cluster 572 with 189 probes
2026-06-03 05:11:43,598 - cnv_pipe.batch.run_model.cluster572 - INFO - Child process finished cluster 572. Wrote cluster_572_samples.csv and cluster_572_params.csv
2026-06-03 05:11:43,601 - cnv_pipe.batch.run_model - INFO - Cluster 572 finished in 205.03 seconds. Status: SUCCESS