mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nt2xlvqu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:06:03,955 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:06:04,917 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:06:05,108 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:22,425 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:06:22,769 - cnv_pipe.batch.run_model - INFO - Processing cluster 8 with 199 probes
2026-06-03 05:06:23,303 - cnv_pipe.batch.run_model.cluster8 - INFO - Child process started for cluster 8 with 199 probes
2026-06-03 05:09:47,283 - cnv_pipe.batch.run_model.cluster8 - INFO - Child process finished cluster 8. Wrote cluster_8_samples.csv and cluster_8_params.csv
2026-06-03 05:09:47,286 - cnv_pipe.batch.run_model - INFO - Cluster 8 finished in 204.52 seconds. Status: SUCCESS