mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-u3i04aoz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:08:40,366 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:08:41,205 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:08:41,386 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:08:57,260 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:08:57,491 - cnv_pipe.batch.run_model - INFO - Processing cluster 780 with 110 probes
2026-06-03 05:08:57,896 - cnv_pipe.batch.run_model.cluster780 - INFO - Child process started for cluster 780 with 110 probes
2026-06-03 05:11:03,395 - cnv_pipe.batch.run_model.cluster780 - INFO - Child process finished cluster 780. Wrote cluster_780_samples.csv and cluster_780_params.csv
2026-06-03 05:11:03,397 - cnv_pipe.batch.run_model - INFO - Cluster 780 finished in 125.91 seconds. Status: SUCCESS