File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/3718f8e7d9e8fc55551234027ce3b5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-99u7hg8n because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:09:50,463 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:09:51,313 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:09:51,493 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:10:07,261 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:10:07,346 - cnv_pipe.batch.run_model - INFO - Processing cluster 1055 with 77 probes
2026-06-03 05:10:07,723 - cnv_pipe.batch.run_model.cluster1055 - INFO - Child process started for cluster 1055 with 77 probes
2026-06-03 05:11:31,885 - cnv_pipe.batch.run_model.cluster1055 - INFO - Child process finished cluster 1055. Wrote cluster_1055_samples.csv and cluster_1055_params.csv
2026-06-03 05:11:31,886 - cnv_pipe.batch.run_model - INFO - Cluster 1055 finished in 84.54 seconds. Status: SUCCESS