File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/a136be3f5fb7bf8291ed8b1ca1c2ce/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-c4rpbc70 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:06:38,906 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:06:39,933 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:06:40,139 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:58,844 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:06:58,940 - cnv_pipe.batch.run_model - INFO - Processing cluster 130 with 190 probes
2026-06-03 05:06:59,586 - cnv_pipe.batch.run_model.cluster130 - INFO - Child process started for cluster 130 with 190 probes
2026-06-03 05:10:24,360 - cnv_pipe.batch.run_model.cluster130 - INFO - Child process finished cluster 130. Wrote cluster_130_samples.csv and cluster_130_params.csv
2026-06-03 05:10:24,363 - cnv_pipe.batch.run_model - INFO - Cluster 130 finished in 205.42 seconds. Status: SUCCESS