mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4hflwojf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:06:04,095 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:06:05,173 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:06:05,378 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:24,485 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:06:24,767 - cnv_pipe.batch.run_model - INFO - Processing cluster 6 with 165 probes
2026-06-03 05:06:25,257 - cnv_pipe.batch.run_model.cluster6 - INFO - Child process started for cluster 6 with 165 probes
2026-06-03 05:09:29,653 - cnv_pipe.batch.run_model.cluster6 - INFO - Child process finished cluster 6. Wrote cluster_6_samples.csv and cluster_6_params.csv
2026-06-03 05:09:29,656 - cnv_pipe.batch.run_model - INFO - Cluster 6 finished in 184.89 seconds. Status: SUCCESS