File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9d/c6b41c7a20ea3dc2cf32f29d552482/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hbn9ewsx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:10:52,217 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:10:53,138 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:10:53,311 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:11:09,530 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:11:09,752 - cnv_pipe.batch.run_model - INFO - Processing cluster 1395 with 199 probes
2026-06-03 05:11:10,160 - cnv_pipe.batch.run_model.cluster1395 - INFO - Child process started for cluster 1395 with 199 probes
2026-06-03 05:13:54,812 - cnv_pipe.batch.run_model.cluster1395 - INFO - Child process finished cluster 1395. Wrote cluster_1395_samples.csv and cluster_1395_params.csv
2026-06-03 05:13:54,814 - cnv_pipe.batch.run_model - INFO - Cluster 1395 finished in 165.06 seconds. Status: SUCCESS