mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xvwtw9d_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:09:52,363 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:09:53,232 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:09:53,417 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:10:09,318 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:10:09,558 - cnv_pipe.batch.run_model - INFO - Processing cluster 1071 with 183 probes
2026-06-03 05:10:09,983 - cnv_pipe.batch.run_model.cluster1071 - INFO - Child process started for cluster 1071 with 183 probes
2026-06-03 05:13:28,330 - cnv_pipe.batch.run_model.cluster1071 - INFO - Child process finished cluster 1071. Wrote cluster_1071_samples.csv and cluster_1071_params.csv
2026-06-03 05:13:28,333 - cnv_pipe.batch.run_model - INFO - Cluster 1071 finished in 198.78 seconds. Status: SUCCESS