mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ccffhzsm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:08:56,263 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:08:57,117 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:08:57,302 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:09:13,100 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:09:13,355 - cnv_pipe.batch.run_model - INFO - Processing cluster 846 with 197 probes
2026-06-03 05:09:13,798 - cnv_pipe.batch.run_model.cluster846 - INFO - Child process started for cluster 846 with 197 probes
2026-06-03 05:12:48,185 - cnv_pipe.batch.run_model.cluster846 - INFO - Child process finished cluster 846. Wrote cluster_846_samples.csv and cluster_846_params.csv
2026-06-03 05:12:48,187 - cnv_pipe.batch.run_model - INFO - Cluster 846 finished in 214.83 seconds. Status: SUCCESS