mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vx6fke2j because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:06:35,276 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:06:36,096 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:06:36,280 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:52,180 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:06:52,413 - cnv_pipe.batch.run_model - INFO - Processing cluster 11 with 189 probes
2026-06-03 05:06:52,800 - cnv_pipe.batch.run_model.cluster11 - INFO - Child process started for cluster 11 with 189 probes
2026-06-03 05:10:18,163 - cnv_pipe.batch.run_model.cluster11 - INFO - Child process finished cluster 11. Wrote cluster_11_samples.csv and cluster_11_params.csv
2026-06-03 05:10:18,166 - cnv_pipe.batch.run_model - INFO - Cluster 11 finished in 205.75 seconds. Status: SUCCESS