mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-31zotjx1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:09:32,696 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:09:33,526 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:09:33,699 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:09:49,443 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:09:49,680 - cnv_pipe.batch.run_model - INFO - Processing cluster 980 with 195 probes
2026-06-03 05:09:50,083 - cnv_pipe.batch.run_model.cluster980 - INFO - Child process started for cluster 980 with 195 probes
2026-06-03 05:13:09,454 - cnv_pipe.batch.run_model.cluster980 - INFO - Child process finished cluster 980. Wrote cluster_980_samples.csv and cluster_980_params.csv
2026-06-03 05:13:09,457 - cnv_pipe.batch.run_model - INFO - Cluster 980 finished in 199.78 seconds. Status: SUCCESS