mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lbdlquol because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:06:31,621 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:06:32,652 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:06:32,858 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:51,967 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:06:52,253 - cnv_pipe.batch.run_model - INFO - Processing cluster 123 with 187 probes
2026-06-03 05:06:52,752 - cnv_pipe.batch.run_model.cluster123 - INFO - Child process started for cluster 123 with 187 probes
2026-06-03 05:10:21,500 - cnv_pipe.batch.run_model.cluster123 - INFO - Child process finished cluster 123. Wrote cluster_123_samples.csv and cluster_123_params.csv
2026-06-03 05:10:21,503 - cnv_pipe.batch.run_model - INFO - Cluster 123 finished in 209.25 seconds. Status: SUCCESS