File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f9/2aa32aa6af3fa41cc61ebaabc899c7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-230jprp8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:11:03,208 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:11:04,040 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:11:04,228 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:11:21,128 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:11:21,228 - cnv_pipe.batch.run_model - INFO - Processing cluster 1312 with 197 probes
2026-06-03 05:11:21,702 - cnv_pipe.batch.run_model.cluster1312 - INFO - Child process started for cluster 1312 with 197 probes
2026-06-03 05:14:44,620 - cnv_pipe.batch.run_model.cluster1312 - INFO - Child process finished cluster 1312. Wrote cluster_1312_samples.csv and cluster_1312_params.csv
2026-06-03 05:14:44,625 - cnv_pipe.batch.run_model - INFO - Cluster 1312 finished in 203.40 seconds. Status: SUCCESS