mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s2mdfv9t because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:12:38,456 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:12:39,297 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:12:39,476 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:12:56,225 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:12:56,457 - cnv_pipe.batch.run_model - INFO - Processing cluster 407 with 199 probes
2026-06-03 05:12:56,897 - cnv_pipe.batch.run_model.cluster407 - INFO - Child process started for cluster 407 with 199 probes
2026-06-03 05:16:18,173 - cnv_pipe.batch.run_model.cluster407 - INFO - Child process finished cluster 407. Wrote cluster_407_samples.csv and cluster_407_params.csv
2026-06-03 05:16:18,176 - cnv_pipe.batch.run_model - INFO - Cluster 407 finished in 201.72 seconds. Status: SUCCESS