mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-c94r0vnx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:55,369 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:56,269 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:56,457 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:15:13,580 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:15:13,798 - cnv_pipe.batch.run_model - INFO - Processing cluster 1263 with 99 probes
2026-06-03 05:15:14,224 - cnv_pipe.batch.run_model.cluster1263 - INFO - Child process started for cluster 1263 with 99 probes
2026-06-03 05:17:00,505 - cnv_pipe.batch.run_model.cluster1263 - INFO - Child process finished cluster 1263. Wrote cluster_1263_samples.csv and cluster_1263_params.csv
2026-06-03 05:17:00,506 - cnv_pipe.batch.run_model - INFO - Cluster 1263 finished in 106.71 seconds. Status: SUCCESS