mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-o75q69wa because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:12:53,600 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:12:54,404 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:12:54,579 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:09,749 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:09,951 - cnv_pipe.batch.run_model - INFO - Processing cluster 513 with 159 probes
2026-06-03 05:13:10,339 - cnv_pipe.batch.run_model.cluster513 - INFO - Child process started for cluster 513 with 159 probes
2026-06-03 05:15:52,794 - cnv_pipe.batch.run_model.cluster513 - INFO - Child process finished cluster 513. Wrote cluster_513_samples.csv and cluster_513_params.csv
2026-06-03 05:15:52,796 - cnv_pipe.batch.run_model - INFO - Cluster 513 finished in 162.84 seconds. Status: SUCCESS