File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/33/70700b2e14c5de246c4107879d43be/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gavjh2h8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:42,685 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:43,554 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:43,733 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:15:00,624 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:15:00,865 - cnv_pipe.batch.run_model - INFO - Processing cluster 1196 with 184 probes
2026-06-03 05:15:01,272 - cnv_pipe.batch.run_model.cluster1196 - INFO - Child process started for cluster 1196 with 184 probes
2026-06-03 05:17:59,548 - cnv_pipe.batch.run_model.cluster1196 - INFO - Child process finished cluster 1196. Wrote cluster_1196_samples.csv and cluster_1196_params.csv
2026-06-03 05:17:59,551 - cnv_pipe.batch.run_model - INFO - Cluster 1196 finished in 178.69 seconds. Status: SUCCESS