mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4ns0zv3i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:03,169 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:03,995 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:04,165 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:19,096 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:19,177 - cnv_pipe.batch.run_model - INFO - Processing cluster 549 with 181 probes
2026-06-03 05:13:19,543 - cnv_pipe.batch.run_model.cluster549 - INFO - Child process started for cluster 549 with 181 probes
2026-06-03 05:16:26,876 - cnv_pipe.batch.run_model.cluster549 - INFO - Child process finished cluster 549. Wrote cluster_549_samples.csv and cluster_549_params.csv
2026-06-03 05:16:26,878 - cnv_pipe.batch.run_model - INFO - Cluster 549 finished in 187.70 seconds. Status: SUCCESS