mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-f3amkcey because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:11:50,570 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:11:51,420 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:11:51,597 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:12:07,654 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:12:07,883 - cnv_pipe.batch.run_model - INFO - Processing cluster 107 with 162 probes
2026-06-03 05:12:08,307 - cnv_pipe.batch.run_model.cluster107 - INFO - Child process started for cluster 107 with 162 probes
2026-06-03 05:15:00,755 - cnv_pipe.batch.run_model.cluster107 - INFO - Child process finished cluster 107. Wrote cluster_107_samples.csv and cluster_107_params.csv
2026-06-03 05:15:00,758 - cnv_pipe.batch.run_model - INFO - Cluster 107 finished in 172.87 seconds. Status: SUCCESS