mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mh2xp7rg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:05,265 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:06,078 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:06,253 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:21,762 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:21,839 - cnv_pipe.batch.run_model - INFO - Processing cluster 557 with 200 probes
2026-06-03 05:13:22,206 - cnv_pipe.batch.run_model.cluster557 - INFO - Child process started for cluster 557 with 200 probes
2026-06-03 05:16:32,497 - cnv_pipe.batch.run_model.cluster557 - INFO - Child process finished cluster 557. Wrote cluster_557_samples.csv and cluster_557_params.csv
2026-06-03 05:16:32,499 - cnv_pipe.batch.run_model - INFO - Cluster 557 finished in 190.66 seconds. Status: SUCCESS