File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b9/c19e8ef7ffaebda723f0a02cb3f520/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-58m_8r0v because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:58,107 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:58,966 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:59,144 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:15:14,375 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:15:14,561 - cnv_pipe.batch.run_model - INFO - Processing cluster 1277 with 194 probes
2026-06-03 05:15:14,936 - cnv_pipe.batch.run_model.cluster1277 - INFO - Child process started for cluster 1277 with 194 probes
2026-06-03 05:18:15,861 - cnv_pipe.batch.run_model.cluster1277 - INFO - Child process finished cluster 1277. Wrote cluster_1277_samples.csv and cluster_1277_params.csv
2026-06-03 05:18:15,863 - cnv_pipe.batch.run_model - INFO - Cluster 1277 finished in 181.30 seconds. Status: SUCCESS