mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bgna5_eh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:11:58,495 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:11:59,753 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:12:00,040 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:12:25,628 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:12:25,769 - cnv_pipe.batch.run_model - INFO - Processing cluster 127 with 185 probes
2026-06-03 05:12:26,542 - cnv_pipe.batch.run_model.cluster127 - INFO - Child process started for cluster 127 with 185 probes
2026-06-03 05:16:28,397 - cnv_pipe.batch.run_model.cluster127 - INFO - Child process finished cluster 127. Wrote cluster_127_samples.csv and cluster_127_params.csv
2026-06-03 05:16:28,399 - cnv_pipe.batch.run_model - INFO - Cluster 127 finished in 242.63 seconds. Status: SUCCESS