mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pjwadcej because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:02,262 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:03,189 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:03,369 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:14:20,419 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:14:20,498 - cnv_pipe.batch.run_model - INFO - Processing cluster 904 with 175 probes
2026-06-03 05:14:20,892 - cnv_pipe.batch.run_model.cluster904 - INFO - Child process started for cluster 904 with 175 probes
2026-06-03 05:17:15,527 - cnv_pipe.batch.run_model.cluster904 - INFO - Child process finished cluster 904. Wrote cluster_904_samples.csv and cluster_904_params.csv
2026-06-03 05:17:15,528 - cnv_pipe.batch.run_model - INFO - Cluster 904 finished in 175.03 seconds. Status: SUCCESS