mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ymzydcn8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:09,209 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:10,010 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:10,178 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:25,248 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:25,460 - cnv_pipe.batch.run_model - INFO - Processing cluster 569 with 160 probes
2026-06-03 05:13:25,846 - cnv_pipe.batch.run_model.cluster569 - INFO - Child process started for cluster 569 with 160 probes
2026-06-03 05:16:10,053 - cnv_pipe.batch.run_model.cluster569 - INFO - Child process finished cluster 569. Wrote cluster_569_samples.csv and cluster_569_params.csv
2026-06-03 05:16:10,056 - cnv_pipe.batch.run_model - INFO - Cluster 569 finished in 164.60 seconds. Status: SUCCESS