mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-djhaai9l because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:10,358 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:11,247 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:11,434 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:14:27,628 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:14:27,849 - cnv_pipe.batch.run_model - INFO - Processing cluster 956 with 191 probes
2026-06-03 05:14:28,236 - cnv_pipe.batch.run_model.cluster956 - INFO - Child process started for cluster 956 with 191 probes
2026-06-03 05:17:29,810 - cnv_pipe.batch.run_model.cluster956 - INFO - Child process finished cluster 956. Wrote cluster_956_samples.csv and cluster_956_params.csv
2026-06-03 05:17:29,812 - cnv_pipe.batch.run_model - INFO - Cluster 956 finished in 181.96 seconds. Status: SUCCESS