File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/b2c946cc77df1595ff7909284d05bd/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fowcpyhy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:06,474 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:07,400 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:07,591 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:14:26,450 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:14:26,696 - cnv_pipe.batch.run_model - INFO - Processing cluster 928 with 184 probes
2026-06-03 05:14:27,134 - cnv_pipe.batch.run_model.cluster928 - INFO - Child process started for cluster 928 with 184 probes
2026-06-03 05:17:31,918 - cnv_pipe.batch.run_model.cluster928 - INFO - Child process finished cluster 928. Wrote cluster_928_samples.csv and cluster_928_params.csv
2026-06-03 05:17:31,920 - cnv_pipe.batch.run_model - INFO - Cluster 928 finished in 185.22 seconds. Status: SUCCESS