File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e5/1a20717092404f6154be1e75bcabf1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7go9mk28 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:14:40,077 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:14:41,095 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:14:41,292 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:14:59,434 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:14:59,527 - cnv_pipe.batch.run_model - INFO - Processing cluster 1176 with 50 probes
2026-06-03 05:15:00,061 - cnv_pipe.batch.run_model.cluster1176 - INFO - Child process started for cluster 1176 with 50 probes
2026-06-03 05:15:55,169 - cnv_pipe.batch.run_model.cluster1176 - INFO - Child process finished cluster 1176. Wrote cluster_1176_samples.csv and cluster_1176_params.csv
2026-06-03 05:15:55,170 - cnv_pipe.batch.run_model - INFO - Cluster 1176 finished in 55.64 seconds. Status: SUCCESS