mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-242mzaxh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:12:49,126 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:12:49,914 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:12:50,079 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:05,050 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:05,132 - cnv_pipe.batch.run_model - INFO - Processing cluster 472 with 177 probes
2026-06-03 05:13:05,504 - cnv_pipe.batch.run_model.cluster472 - INFO - Child process started for cluster 472 with 177 probes
2026-06-03 05:16:07,843 - cnv_pipe.batch.run_model.cluster472 - INFO - Child process finished cluster 472. Wrote cluster_472_samples.csv and cluster_472_params.csv
2026-06-03 05:16:07,846 - cnv_pipe.batch.run_model - INFO - Cluster 472 finished in 182.71 seconds. Status: SUCCESS