mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qru0i0jn because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:23,385 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:24,183 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:24,360 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:39,774 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:39,981 - cnv_pipe.batch.run_model - INFO - Processing cluster 634 with 145 probes
2026-06-03 05:13:40,356 - cnv_pipe.batch.run_model.cluster634 - INFO - Child process started for cluster 634 with 145 probes
2026-06-03 05:16:13,275 - cnv_pipe.batch.run_model.cluster634 - INFO - Child process finished cluster 634. Wrote cluster_634_samples.csv and cluster_634_params.csv
2026-06-03 05:16:13,279 - cnv_pipe.batch.run_model - INFO - Cluster 634 finished in 153.30 seconds. Status: SUCCESS