mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-91cz9v64 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:12:37,682 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:12:38,502 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:12:38,678 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:12:54,689 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:12:54,774 - cnv_pipe.batch.run_model - INFO - Processing cluster 405 with 121 probes
2026-06-03 05:12:55,147 - cnv_pipe.batch.run_model.cluster405 - INFO - Child process started for cluster 405 with 121 probes
2026-06-03 05:15:00,738 - cnv_pipe.batch.run_model.cluster405 - INFO - Child process finished cluster 405. Wrote cluster_405_samples.csv and cluster_405_params.csv
2026-06-03 05:15:00,740 - cnv_pipe.batch.run_model - INFO - Cluster 405 finished in 125.97 seconds. Status: SUCCESS