mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ibkstdli because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:05,364 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:06,300 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:06,478 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:23,426 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:23,628 - cnv_pipe.batch.run_model - INFO - Processing cluster 552 with 177 probes
2026-06-03 05:13:24,041 - cnv_pipe.batch.run_model.cluster552 - INFO - Child process started for cluster 552 with 177 probes
2026-06-03 05:16:19,422 - cnv_pipe.batch.run_model.cluster552 - INFO - Child process finished cluster 552. Wrote cluster_552_samples.csv and cluster_552_params.csv
2026-06-03 05:16:19,424 - cnv_pipe.batch.run_model - INFO - Cluster 552 finished in 175.80 seconds. Status: SUCCESS