File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/abc7d7b88ed4a3dbe6ff01e5f048cb/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-n7j1dbsc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:15:16,411 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:15:17,293 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:15:17,475 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:15:34,123 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:15:34,364 - cnv_pipe.batch.run_model - INFO - Processing cluster 1372 with 183 probes
2026-06-03 05:15:34,789 - cnv_pipe.batch.run_model.cluster1372 - INFO - Child process started for cluster 1372 with 183 probes
2026-06-03 05:18:33,324 - cnv_pipe.batch.run_model.cluster1372 - INFO - Child process finished cluster 1372. Wrote cluster_1372_samples.csv and cluster_1372_params.csv
2026-06-03 05:18:33,325 - cnv_pipe.batch.run_model - INFO - Cluster 1372 finished in 178.96 seconds. Status: SUCCESS