mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-w5dz8uh5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:11:45,693 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:11:46,637 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:11:46,825 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:12:03,577 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:12:03,663 - cnv_pipe.batch.run_model - INFO - Processing cluster 77 with 200 probes
2026-06-03 05:12:04,067 - cnv_pipe.batch.run_model.cluster77 - INFO - Child process started for cluster 77 with 200 probes
2026-06-03 05:15:29,931 - cnv_pipe.batch.run_model.cluster77 - INFO - Child process finished cluster 77. Wrote cluster_77_samples.csv and cluster_77_params.csv
2026-06-03 05:15:29,934 - cnv_pipe.batch.run_model - INFO - Cluster 77 finished in 206.27 seconds. Status: SUCCESS