mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ndtov_fw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:15:11,364 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:15:12,170 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:15:12,336 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:15:27,664 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:15:27,744 - cnv_pipe.batch.run_model - INFO - Processing cluster 1353 with 173 probes
2026-06-03 05:15:28,118 - cnv_pipe.batch.run_model.cluster1353 - INFO - Child process started for cluster 1353 with 173 probes
2026-06-03 05:18:21,842 - cnv_pipe.batch.run_model.cluster1353 - INFO - Child process finished cluster 1353. Wrote cluster_1353_samples.csv and cluster_1353_params.csv
2026-06-03 05:18:21,845 - cnv_pipe.batch.run_model - INFO - Cluster 1353 finished in 174.10 seconds. Status: SUCCESS