mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-sd2kju77 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:00,339 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:01,346 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:01,549 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:19,715 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:19,817 - cnv_pipe.batch.run_model - INFO - Processing cluster 534 with 156 probes
2026-06-03 05:13:20,438 - cnv_pipe.batch.run_model.cluster534 - INFO - Child process started for cluster 534 with 156 probes
2026-06-03 05:16:32,758 - cnv_pipe.batch.run_model.cluster534 - INFO - Child process finished cluster 534. Wrote cluster_534_samples.csv and cluster_534_params.csv
2026-06-03 05:16:32,760 - cnv_pipe.batch.run_model - INFO - Cluster 534 finished in 192.94 seconds. Status: SUCCESS