mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ysqtchi3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:22,006 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:22,832 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:23,003 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:39,110 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:39,199 - cnv_pipe.batch.run_model - INFO - Processing cluster 619 with 183 probes
2026-06-03 05:13:39,702 - cnv_pipe.batch.run_model.cluster619 - INFO - Child process started for cluster 619 with 183 probes
2026-06-03 05:16:48,682 - cnv_pipe.batch.run_model.cluster619 - INFO - Child process finished cluster 619. Wrote cluster_619_samples.csv and cluster_619_params.csv
2026-06-03 05:16:48,685 - cnv_pipe.batch.run_model - INFO - Cluster 619 finished in 189.49 seconds. Status: SUCCESS