mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-goy45apq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:19,240 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:20,043 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:20,211 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:35,476 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:35,725 - cnv_pipe.batch.run_model - INFO - Processing cluster 608 with 182 probes
2026-06-03 05:13:36,098 - cnv_pipe.batch.run_model.cluster608 - INFO - Child process started for cluster 608 with 182 probes
2026-06-03 05:16:39,822 - cnv_pipe.batch.run_model.cluster608 - INFO - Child process finished cluster 608. Wrote cluster_608_samples.csv and cluster_608_params.csv
2026-06-03 05:16:39,824 - cnv_pipe.batch.run_model - INFO - Cluster 608 finished in 184.10 seconds. Status: SUCCESS