mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d_m3cgz1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:11:46,134 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:11:47,396 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:11:47,675 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:12:11,395 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:12:11,680 - cnv_pipe.batch.run_model - INFO - Processing cluster 55 with 200 probes
2026-06-03 05:12:12,290 - cnv_pipe.batch.run_model.cluster55 - INFO - Child process started for cluster 55 with 200 probes
2026-06-03 05:16:51,362 - cnv_pipe.batch.run_model.cluster55 - INFO - Child process finished cluster 55. Wrote cluster_55_samples.csv and cluster_55_params.csv
2026-06-03 05:16:51,365 - cnv_pipe.batch.run_model - INFO - Cluster 55 finished in 279.68 seconds. Status: SUCCESS