mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-10i078bo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:03,180 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:03,982 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:04,149 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:19,200 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:19,404 - cnv_pipe.batch.run_model - INFO - Processing cluster 551 with 185 probes
2026-06-03 05:13:19,788 - cnv_pipe.batch.run_model.cluster551 - INFO - Child process started for cluster 551 with 185 probes
2026-06-03 05:16:13,250 - cnv_pipe.batch.run_model.cluster551 - INFO - Child process finished cluster 551. Wrote cluster_551_samples.csv and cluster_551_params.csv
2026-06-03 05:16:13,252 - cnv_pipe.batch.run_model - INFO - Cluster 551 finished in 173.85 seconds. Status: SUCCESS