mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cdjrqd_9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:12,136 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:12,933 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:13,103 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:28,951 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:29,178 - cnv_pipe.batch.run_model - INFO - Processing cluster 578 with 178 probes
2026-06-03 05:13:29,551 - cnv_pipe.batch.run_model.cluster578 - INFO - Child process started for cluster 578 with 178 probes
2026-06-03 05:16:36,343 - cnv_pipe.batch.run_model.cluster578 - INFO - Child process finished cluster 578. Wrote cluster_578_samples.csv and cluster_578_params.csv
2026-06-03 05:16:36,346 - cnv_pipe.batch.run_model - INFO - Cluster 578 finished in 187.17 seconds. Status: SUCCESS