mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dpvrl6j0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:12:58,378 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:12:59,703 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:12:59,979 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:24,428 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:24,559 - cnv_pipe.batch.run_model - INFO - Processing cluster 517 with 192 probes
2026-06-03 05:13:25,377 - cnv_pipe.batch.run_model.cluster517 - INFO - Child process started for cluster 517 with 192 probes
2026-06-03 05:17:52,999 - cnv_pipe.batch.run_model.cluster517 - INFO - Child process finished cluster 517. Wrote cluster_517_samples.csv and cluster_517_params.csv
2026-06-03 05:17:53,002 - cnv_pipe.batch.run_model - INFO - Cluster 517 finished in 268.44 seconds. Status: SUCCESS