mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pehg90vr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:11:52,182 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:11:53,191 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:11:53,388 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:12:10,418 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:12:10,510 - cnv_pipe.batch.run_model - INFO - Processing cluster 112 with 172 probes
2026-06-03 05:12:11,036 - cnv_pipe.batch.run_model.cluster112 - INFO - Child process started for cluster 112 with 172 probes
2026-06-03 05:15:13,954 - cnv_pipe.batch.run_model.cluster112 - INFO - Child process finished cluster 112. Wrote cluster_112_samples.csv and cluster_112_params.csv
2026-06-03 05:15:13,957 - cnv_pipe.batch.run_model - INFO - Cluster 112 finished in 183.45 seconds. Status: SUCCESS