File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/be/d72addbe55ffa74e845b5a150fc2b3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ibnor34u because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:11:54,747 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:11:55,848 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:11:56,075 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:12:15,993 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:12:16,281 - cnv_pipe.batch.run_model - INFO - Processing cluster 124 with 195 probes
2026-06-03 05:12:16,779 - cnv_pipe.batch.run_model.cluster124 - INFO - Child process started for cluster 124 with 195 probes
2026-06-03 05:15:22,265 - cnv_pipe.batch.run_model.cluster124 - INFO - Child process finished cluster 124. Wrote cluster_124_samples.csv and cluster_124_params.csv
2026-06-03 05:15:22,267 - cnv_pipe.batch.run_model - INFO - Cluster 124 finished in 185.99 seconds. Status: SUCCESS