mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-z1nz3i8s because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:12:47,281 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:12:48,101 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:12:48,270 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:04,184 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:04,270 - cnv_pipe.batch.run_model - INFO - Processing cluster 462 with 143 probes
2026-06-03 05:13:04,792 - cnv_pipe.batch.run_model.cluster462 - INFO - Child process started for cluster 462 with 143 probes
2026-06-03 05:15:29,588 - cnv_pipe.batch.run_model.cluster462 - INFO - Child process finished cluster 462. Wrote cluster_462_samples.csv and cluster_462_params.csv
2026-06-03 05:15:29,589 - cnv_pipe.batch.run_model - INFO - Cluster 462 finished in 145.32 seconds. Status: SUCCESS