mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-l5ia7xki because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:13:34,477 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:13:35,371 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:13:35,561 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:13:51,626 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:13:51,823 - cnv_pipe.batch.run_model - INFO - Processing cluster 709 with 143 probes
2026-06-03 05:13:52,197 - cnv_pipe.batch.run_model.cluster709 - INFO - Child process started for cluster 709 with 143 probes
2026-06-03 05:16:12,631 - cnv_pipe.batch.run_model.cluster709 - INFO - Child process finished cluster 709. Wrote cluster_709_samples.csv and cluster_709_params.csv
2026-06-03 05:16:12,633 - cnv_pipe.batch.run_model - INFO - Cluster 709 finished in 140.81 seconds. Status: SUCCESS